Wednesday, February 20, 2013

02/20/13


Today, as soon as I arrived, I was put to work as to making the two buffers. Applying the knowledge that I learned last week—about finding the correct calculations pertaining to the measurement of the particular substance—, I was asked to find the target amount. When last week, I dealt with a liquid (though only hypothetical because I didn’t actually get to create the mixture), this week, I prepared a buffer using solids: Na4O7P2 (446.06 Mw) and H2Na2O7P2 (221.94 Mw). Wanting a total volume of 20mL in each of the two buffers that I was going to prepare, I found the weight of the former and latter solutions needed in grams. To do this I used the formula: weight of solute (g)= formula weight of solute (g/mol) x molarity (mol/L) x final volume (L). After finding the measurements 1.7624g and 0.8878g respectively, all was left for me to do was put combine the various components into their vials.

After having prepared this, Yolanda told me that we were looking to attain a mixture of the two buffers with a pH of 7. Unfortunately, we were not able continue with the next steps because the Na4O7P2 did not dissolve with the H20 as expected. This said, my mentor did walk me through the steps that we would have performed had the substance dissolved. By using the pH measuring apparatus, we would—similar to that of trial-&-error—pour in a new vial a portion of the H2Na2O7P2, which had a pH of 10, and Na4O7P2, which had a pH of 6. Using the pH machine, we would add a little bit of each until the number 7 pops on the screen, thus indicating us that our target goal has been achieved.



In a broader scope, this pertains to the entire goal of capillary electrophoresis (electrophoresis separates macromolecules by size, charge, and/or properties) as a buffer is needed for the conduction of charge. This charge is transmitted by the ions provided by the buffer. In addition, “the buffer, by providing a reservoir of weak acid and base, also keeps the pH within a narrow range. This is important because the structure and charge of a protein or nucleic acid will change if subjected to significant pH changes, thus preventing proper separation.”
Next week, my mentor and I are hoping that the substance will have dissolved and then go from there to continue what we left unfinished today.

The Purpose of Buffer in Electrophoresis. Retrieved from http://www.ehow.com/about_6613320_purpose-buffer-electrophoresis.html.

1 comment:

  1. Seems like you are making progress. I am looking forward to the day when you actually run electrophoresis!

    I like how you added text to your image. It makes the photograph even more useful.

    Keep up the good effort!

    ReplyDelete